Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914189.1_cds_XP_016464223.1_57282
CDS Infomation

[gene=LOC107787200] [db_xref=GeneID:107787200] [protein=sulfite reductase 1 [ferredoxin], chloroplastic-like] [protein_id=XP_016464223.1] [location=join(31884..32069,32835..33614,33700..33996,34124..34321,35001..35135,35221..35337,35463..35621,35776..35985)] [gbkey=CDS]
Sequence

ATGACGACGTCGTTTGGAGCAGCGATCAACGTCGCCGCCGTCGATGACCCGAACCCGAAG
CTCCAAATTCAGAAGTTCAACGGGTTAAAAAGCACCTCCAATTCGCTGTTGCTTAGCAGA
CGTCTTCACGTTTTTCAGTCCTTTTCCCCGTCGAATCCCAGTTCTATTGTCCGCGCCGTA
TCTACGCCAGCAAAGCCAGCTGCAGTGGAGCCCAAGCGTAGTAAGGTTGAAATATTCAAA
GAACAGAGTAACTTCATAAGATATCCTCTTAATGAGGAGATTCTAAATGATGCCCCCAAC
ATCAATGAGGCTGCAACACAATTGATCAAGTTCCATGGAAGCTATATGCAATACGACAGA
GATGAGCGTGGGGGAAGATCATACTCATTCATGCTTCGGACAAAGAACCCTGGTGGGGAG
GTACCAAACAGACTCTACTTGGTCATGGATGATCTTGCTGACCAATTTGGAATTGGGACA
CTTCGTTTGACGACAAGACAAACCTTTCAGCTGCATGGGGTCTTGAAAAAAGACCTGAAG
ACAGTAATGAGTACAATCATCAGAAACATGGGTTCAACTCTTGGTGCATGTGGTGACCTC
AATAGGAACGTTCTTGCTCCAGCTGCCCCATTTGCTAAAAAAGATTATATGTTTGCTAAA
CAAACAGCTGATAACATTGCAGCACTTTTAACTCCCCAATCTGGATTTTACTATGACGTT
TGGGTGGATGGGGAGAAAGTTATGACAGCAGAACCTCCTGAAGTTGTGAAAGCTCGAAAT
GATAACTCCCATGGAACAAACTTCCCCGACTCACCTGAACCCATTTATGGAACTCAGTTC
TTGCCAAGGAAGTTCAAAATTGCAGTTACTGTGCCAGCTGATAACTCTGTGGACATCTTC
ACCAATGATATAGGCGTTGTTGTTGTATCTAATGAGGATGGAGAGCCTCAGGGATTCAAC
ATATATGTTGGTGGTGGTATGGGGCGAACTCATAGGATGGAAACCACTTTTCCTCGTTTG
GCAGAGCCATTAGGTTATGTGCCTAAAGAGGATATACTCTATGCTGTTAAAGCTATTGTT
GTTAGTCAAAGAGAAAACGGCAGAAGAGATGATCGCAGGTACAGCAGATTGAAATATTTA
CTCAGCTCATGGGGAATCGAGAAGTTTCGATCTGTCACTGAACAGTATTACGGAAAGAAG
TTTGAACCTTGCCGTGAATTGCCTGAGTGGGAATTCAAGAGTTATTTGGGATGGCATGAA
GCAGGAGACGGTAGTTTGTTTTGTGGTCTACATGTTGACAATGGTCGTGTAAAAGGAGCG
ATGAAGAAGGCACTCAGGGAAGTTATTGAGAAGTATAATCTGAATGTGCGTCTCACACCC
AACCAGAATATTATCTTGTGCAATATTCGACAAGCGTGGAAGCGCCCCATCACCACAGTT
CTTGCACAGGGTGGTTTGCTGCAACCTAGGTATGTGGATCCTCTCAATCTAACAGCGATG
GCCTGCCCGGCTTTTCCGCTTTGTCCTCTTGCAATAACTGAAGCTGAACGTGGAATACCT
GACATCCTCAAGCGTGTTCGAGCTATTTTTGAAAAGGTTGGTCTGAAGTACAGTGAATCT
GTCGTCATAAGGGTAACAGGCTGTCCTAATGGATGTGCTAGACCATACATGGCTGAACTT
GGCTTGGTAGGAGATGGTCCAAACAGCTATCAGATATGGCTCGGTGGTACTCCCAATCAA
ACTTCATTGGCAAAAACTTTCAAGGATAAGGTTAAGGTTCAGGATCTTGAAAAAGTTCTG
GAGCCTTTATTTTTCCATTGGAGAAGAAAGCGACAATCTAAAGAATCATTTGGCGACTTC
ACAAACCGCATGGGATTTGAGAAACTTGGAGAGTTTGTTGAAAAATGGGAAGGCATCCCC
GAGTCATCATCTCGATATAACTTGAAGCTATTTGCTGATAGAGAGACTTACGAAGCCATG
GATGCACTTGCAAGCATCCAAGATAAAAATGCCCATCAATTGGCAATTGAAGTAGTGCGC
AATTATGTTGCTTCCCAGCAAAATGGGAAAAGTATGGACTGA

Peptide Sequence

PEP ID

XP_016464223.1
PEP Infomation

PREDICTED: sulfite reductase 1 [ferredoxin], chloroplastic-like [Nicotiana tabacum]
Sequence

MTTSFGAAINVAAVDDPNPKLQIQKFNGLKSTSNSLLLSRRLHVFQSFSPSNPSSIVRAV
STPAKPAAVEPKRSKVEIFKEQSNFIRYPLNEEILNDAPNINEAATQLIKFHGSYMQYDR
DERGGRSYSFMLRTKNPGGEVPNRLYLVMDDLADQFGIGTLRLTTRQTFQLHGVLKKDLK
TVMSTIIRNMGSTLGACGDLNRNVLAPAAPFAKKDYMFAKQTADNIAALLTPQSGFYYDV
WVDGEKVMTAEPPEVVKARNDNSHGTNFPDSPEPIYGTQFLPRKFKIAVTVPADNSVDIF
TNDIGVVVVSNEDGEPQGFNIYVGGGMGRTHRMETTFPRLAEPLGYVPKEDILYAVKAIV
VSQRENGRRDDRRYSRLKYLLSSWGIEKFRSVTEQYYGKKFEPCRELPEWEFKSYLGWHE
AGDGSLFCGLHVDNGRVKGAMKKALREVIEKYNLNVRLTPNQNIILCNIRQAWKRPITTV
LAQGGLLQPRYVDPLNLTAMACPAFPLCPLAITEAERGIPDILKRVRAIFEKVGLKYSES
VVIRVTGCPNGCARPYMAELGLVGDGPNSYQIWLGGTPNQTSLAKTFKDKVKVQDLEKVL
EPLFFHWRRKRQSKESFGDFTNRMGFEKLGEFVEKWEGIPESSSRYNLKLFADRETYEAM
DALASIQDKNAHQLAIEVVRNYVASQQNGKSMD

Transcript Sequence

Gene sequence data has not been registered.